Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTAAAGCCGTAGCTGG
...(((((((((((.(((((.&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014774
GeneSymbolEFCAB14
Binding site3400,3418
Score1.0
Seed0
Au0.471
Energy-23.3
Binding len18
Me-7.25
Phylopstem1.4844244454545454
Phylopflank1.5265069150000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure