Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCTGGACAGCCTCTTGCC
..(((((((((((((((((((&))))))))))))..))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014777
GeneSymbolURB2
Binding site2829,2855
Score0.923
Seed1
Au0.544
Energy-23.4
Binding len26
Me-4.957
Phylopstem1.5009042808000002
Phylopflank1.2800124632500003
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure