Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAGCCTCCCTGCAGGGCAGACAGAGCCTCAGCCTCAGCTGCAGG
(((((((((.(((((..((((&.))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014784
GeneSymbolARHGEF11
Binding site5566,5616
Score0.808
Seed1
Au0.353
Energy-27.0
Binding len21
Me-5.413
Phylopstem3.5721848888888883
Phylopflank3.1982378062500008
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure