Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAAAAGCTAAGAACTACCCTGTAGCCAGGA
.((((((.((((..((((.(((&.))).))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014790
GeneSymbolJAKMIP2
Binding site2920,2954
Score0.846
Seed1
Au0.603
Energy-19.3
Binding len22
Me-8.253
Phylopstem-0.02004733333333336
Phylopflank-0.35322031
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure