Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCATTTTGCCGCAGTTTGCAT
.((((((((((((.....(((&))).......))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353694
GeneSymbolTIAM1
Binding site3498,3522
Score0.885
Seed1
Au0.456
Energy-21.2
Binding len24
Me-5.619
Phylopstem4.756880692307693
Phylopflank5.1615509125
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure