Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGCTGCCACAAGCTGCAT
.((((((((.(((.((((((.&)))..))).))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014796
GeneSymbolTESPA1
Binding site1818,1841
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len23
Me-5.893
Phylopstem0.5452677333333332
Phylopflank-0.004179064999999991
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure