Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGGAAACTGCACTGCC
..((((.(((((((((((((.&)))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014796
GeneSymbolTESPA1
Binding site1686,1708
Score0.846
Seed0
Au0.471
Energy-19.5
Binding len22
Me-6.501
Phylopstem-0.18685446470588235
Phylopflank0.1909224425
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure