Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCATGGCTGCGGCTGG
...(((((((((((((..(((&)))..)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014798
GeneSymbolPLEKHM1
Binding site463,484
Score0.923
Seed0
Au0.324
Energy-22.6
Binding len21
Me-6.515
Phylopstem-0.18124740000000006
Phylopflank0.22059473999999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure