Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACATCATATGTCAGGC
.(((((((((..((((.(((..&)))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014801
GeneSymbolPCNX2
Binding site4276,4295
Score1.0
Seed1
Au0.618
Energy-17.7
Binding len19
Me-9.965
Phylopstem2.9336256666666665
Phylopflank2.8436881637500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure