Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCACTGGACGTCAGCGCTCCCGCAGCTATGATCGCAGCCTGCAGC
(((((((((((((((((....&.)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014806
GeneSymbolRUSC2
Binding site1616,1667
Score0.846
Seed1
Au0.294
Energy-22.9
Binding len20
Me-3.938
Phylopstem2.7085775
Phylopflank3.577847815
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure