Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCCTTATCAGGTGACCAGGG
.((((((((.....((((((((&))))))))........))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014809
GeneSymbolKIAA0319
Binding site5442,5468
Score0.923
Seed1
Au0.588
Energy-17.7
Binding len26
Me-13.353
Phylopstem1.1527321124999999
Phylopflank0.833239183
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure