Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGCATGTCAAATCCACACAGATGTCAGCGGCAGCTGCT
..((((((((.((((......&.)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014811
GeneSymbolPPP1R26
Binding site4815,4858
Score0.923
Seed1
Au0.368
Energy-23.0
Binding len15
Me-8.015
Phylopstem-0.676870692875
Phylopflank-0.45152168322500036
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure