Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGCTGTTTCAGCCGCAGCTGA
...((((((((((((...(((&.)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014812
GeneSymbolCEP170
Binding site4918,4944
Score1.0
Seed0
Au0.515
Energy-25.8
Binding len21
Me-6.748
Phylopstem2.0391551833333335
Phylopflank2.358074181
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure