Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCCGCCCGCGCCGCCGCCGCAGCTGCT
..(((((((((((.((..(((&.))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014826
GeneSymbolCDC42BPA
Binding site268,301
Score0.923
Seed1
Au0.353
Energy-27.5
Binding len19
Me-5.814
Phylopstem4.323118272727273
Phylopflank2.7715995512499996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure