Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCGCGGAAGCGAC
((((..(((((((((..(((.&))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014826
GeneSymbolCDC42BPA
Binding site164,183
Score0.846
Seed0
Au0.25
Energy-22.1
Binding len19
Me-10.191
Phylopstem2.0719607777777775
Phylopflank3.0041451637500005
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure