Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAGTGTGCCGGC
..(((((((((..(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014830
GeneSymbolZBTB39
Binding site3538,3555
Score0.923
Seed1
Au0.324
Energy-21.6
Binding len17
Me-9.593
Phylopstem1.5393141111111115
Phylopflank1.0220897000000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure