Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCACAGCCCACGCAGCTGG
...(((((((((((((..(((&)))...))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014830
GeneSymbolZBTB39
Binding site3549,3572
Score0.923
Seed0
Au0.426
Energy-23.1
Binding len23
Me-6.515
Phylopstem0.9074763125
Phylopflank1.31743714
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure