Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGTGGCTGCT
..((((((((((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014836
GeneSymbolRHOBTB1
Binding site125,140
Score0.923
Seed1
Au0.162
Energy-26.0
Binding len15
Me-4.957
Phylopstem2.548657714285714
Phylopflank3.5418070699999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure