Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCCGCAGCCTCTGTGCAC
.((((((((((((..((((((&)))))))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014838
GeneSymbolZBED4
Binding site5503,5527
Score0.923
Seed1
Au0.353
Energy-23.9
Binding len24
Me-5.386
Phylopstem-0.4362752647058823
Phylopflank-0.6784432550000001
Longest consecutive pairings14
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure