Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCCCGGCCGCGCTGTGAC
(((((((.(((((((...(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014838
GeneSymbolZBED4
Binding site2739,2761
Score0.923
Seed1
Au0.324
Energy-21.7
Binding len22
Me-6.484
Phylopstem3.087554742857143
Phylopflank4.3213619762499995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure