Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGAGACTGCAATGTTGCC
..((((((((((((...((((&))))....)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014846
GeneSymbolWASHC5
Binding site1395,1418
Score0.846
Seed1
Au0.5
Energy-19.8
Binding len23
Me-5.925
Phylopstem5.0407022857142865
Phylopflank5.806523725
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure