Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCGATCCAGCCTCCCTTTGCTGCAGA
(((((((..((((((((((((&))))))))))))...............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014848
GeneSymbolSV2B
Binding site7371,7406
Score0.846
Seed1
Au0.412
Energy-27.9
Binding len35
Me-7.308
Phylopstem-0.20667655833333334
Phylopflank0.14485150499999996
Longest consecutive pairings12
Position of longest consecutive pairings23
Pairings in 3prime end8
Position3UTR
2D Structure