Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAATCCGCAAACTGCAC
.(((((.((((((((((((((&))))))))).)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014848
GeneSymbolSV2B
Binding site6024,6047
Score0.923
Seed0
Au0.574
Energy-26.9
Binding len23
Me-5.337
Phylopstem-0.4681104333333333
Phylopflank-0.16944930874999997
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure