Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTAACACTGCAGCTGTAAC
((((((((((((.(((.((((&)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014848
GeneSymbolSV2B
Binding site12361,12382
Score0.923
Seed1
Au0.485
Energy-24.2
Binding len21
Me-5.227
Phylopstem-0.3529448
Phylopflank-0.2876606730000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure