Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACCCCACTGTAGCTGTGAC
(((((((((((((.((.(((.&))).))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014849
GeneSymbolSV2A
Binding site3941,3964
Score1.0
Seed1
Au0.559
Energy-21.6
Binding len23
Me-4.794
Phylopstem-0.6517459900000001
Phylopflank1.1541971488749996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure