Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTTTGCCTCAGCTGCC
..(((((((.(((....(((.&)))....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014849
GeneSymbolSV2A
Binding site2600,2619
Score0.846
Seed1
Au0.397
Energy-20.6
Binding len19
Me-8.025
Phylopstem1.3420313428571427
Phylopflank2.73459962875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure