Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCAGTGAGGGGCTTAGCACCTGGACCAGCAGCTGCT
..((((((((((((...((((&.)))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014855
GeneSymbolAP5Z1
Binding site4774,4816
Score0.923
Seed1
Au0.397
Energy-24.8
Binding len20
Me-5.925
Phylopstem-0.20363603538461536
Phylopflank-0.60214017875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure