Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCATTGCCCTGGTC
(((.((((....((((((((((&))))))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014856
GeneSymbolDENND4B
Binding site5228,5248
Score0.846
Seed0
Au0.588
Energy-17.4
Binding len20
Me-15.44
Phylopstem2.2962813
Phylopflank2.9382351862499996
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure