Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCACCTGTAT
.(((((.(((((((((.....&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014866
GeneSymbolSEC16A
Binding site5798,5814
Score1.0
Seed0
Au0.397
Energy-21.8
Binding len16
Me-5.337
Phylopstem0.18461785555555546
Phylopflank0.47210956
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure