Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAACTGCAGCTCCGAG
(((.(((((((((((...(((&)))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014869
GeneSymbolIQSEC1
Binding site1722,1743
Score1.0
Seed0
Au0.412
Energy-22.2
Binding len21
Me-7.203
Phylopstem0.18892477272727282
Phylopflank0.32944401874999996
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure