Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTATGGCCAAAGCTGTAAG
((((((((..(((((((((((&))))).))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353810
GeneSymbolATP11C
Binding site4032,4055
Score0.974
Seed1
Au0.676
Energy-22.2
Binding len23
Me-6.236
Phylopstem4.8123562333333325
Phylopflank2.0460295825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure