Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCT
..(((((((((((((((.((.&.))...)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014870
GeneSymbolZBTB40
Binding site209,255
Score1.0
Seed1
Au0.397
Energy-27.6
Binding len23
Me-4.957
Phylopstem3.03010570625
Phylopflank1.8528887462499994
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position5UTR
2D Structure