Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCTGCGGGATCTGCAAC
(((((((((((((((.((((.&)))))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014870
GeneSymbolZBTB40
Binding site3236,3259
Score0.942
Seed1
Au0.441
Energy-24.4
Binding len23
Me-4.171
Phylopstem4.084895833333334
Phylopflank4.295803214999999
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure