Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGGCCAAACAAGTCCCAAGAATGCAGCTGTC
..((((((((((((.(.((((&)))).).)))).................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014871
GeneSymbolPAN2
Binding site3789,3826
Score0.846
Seed1
Au0.426
Energy-20.6
Binding len37
Me-5.692
Phylopstem5.209482772413794
Phylopflank4.52279242875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure