Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTATCGTGACCAACAGCTGCT
..(((((((.(((((((((((&)))))))...))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014873
GeneSymbolLPGAT1
Binding site676,700
Score1.0
Seed1
Au0.618
Energy-20.7
Binding len24
Me-6.2
Phylopstem0.16702809285714285
Phylopflank0.10102897125000003
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure