Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGCCATTGATTATTATAGCTCAGCAAA
(((((((((.((((((((((.&))))))))))...........)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353824
GeneSymbolZNF334
Binding site398,431
Score0.846
Seed1
Au0.618
Energy-18.1
Binding len33
Me-5.18
Phylopstem1.066066554
Phylopflank0.7132771595000001
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end7
Position5UTR
2D Structure