Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCGGGATGGATCAGGTGCGGCTGA
...((((((((((((.(((((&))))))))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014889
GeneSymbolPITRM1
Binding site2224,2255
Score1.0
Seed0
Au0.485
Energy-19.2
Binding len31
Me-6.748
Phylopstem4.1277308176
Phylopflank2.75079788725
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure