Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCCGCAGCCGCC
..((.((((((((.((..(((&)))...)).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014891
GeneSymbolPDAP1
Binding site19,40
Score0.846
Seed0
Au0.309
Energy-23.2
Binding len21
Me-9.933
Phylopstem1.0320360000000002
Phylopflank1.011006328472222
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure