Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTACACAAAGGAGAACCAGGAGAGCTGCCTCTGTTGCCGCAGCTA
....(((((((((....((((&.)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014897
GeneSymbolZNF652
Binding site875,923
Score0.897
Seed0
Au0.456
Energy-21.3
Binding len20
Me-11.372
Phylopstem-1.436326111111111
Phylopflank0.24563831375000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure