Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCATCCGTACCTTTTGCTGTG
..((((((((((.(((((((.&))))))).)))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014900
GeneSymbolCOBLL1
Binding site8130,8155
Score1.0
Seed1
Au0.529
Energy-20.0
Binding len25
Me-6.246
Phylopstem0.6771343625
Phylopflank1.5859179350000001
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure