Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACACATGCTAGGC
.((((((((....(((((....&))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014906
GeneSymbolPPM1E
Binding site4455,4470
Score0.846
Seed1
Au0.588
Energy-15.7
Binding len15
Me-12.497
Phylopstem0.79552055
Phylopflank0.6629024175000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure