Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGTAAGGGAGTGAAAAGAAAGGCTAGCCGGAGGCTGCGGGGG
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001353869
GeneSymbolTTC23
Binding site2341,2385
Score0.877
Seed0
Au0.382
Energy-27.9
Binding len15
Me-6.515
Phylopstem0.7923245384615385
Phylopflank1.0155166637499997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure