Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCATGTATACGTGTGTGTGCACAGGA
.((((((((((((((((.....&.))))).))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014911
GeneSymbolAAK1
Binding site14490,14520
Score0.885
Seed1
Au0.5
Energy-19.9
Binding len20
Me-3.793
Phylopstem0.4996005555555556
Phylopflank0.47094102749999994
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure