Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAAATCAACCCAGCTGCTCCAGGCAGCTGCAGCTGA
...(((((((((((((..((.&.))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014911
GeneSymbolAAK1
Binding site2343,2384
Score1.0
Seed0
Au0.456
Energy-25.3
Binding len19
Me-6.515
Phylopstem0.1690185
Phylopflank0.54309095
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure