Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAAGCCGTCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCC
..(((((.((((((((((.((&.))..)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014912
GeneSymbolCPEB3
Binding site812,857
Score0.846
Seed0
Au0.265
Energy-26.5
Binding len22
Me-7.271
Phylopstem3.2998339999999993
Phylopflank3.3281272125
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure