Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACATCAGGAAGGAGGATGGAGGCTGGTGG
(((((((((((((((((((...&)).))))))))))........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353890
GeneSymbolSH3KBP1
Binding site372,401
Score0.846
Seed1
Au0.456
Energy-21.5
Binding len29
Me-3.938
Phylopstem-0.29180435000000005
Phylopflank-0.28597871500000005
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure