Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGAAGGCAGCTGCC
..((((((((..(((((((((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014914
GeneSymbolAGAP1
Binding site4567,4587
Score0.923
Seed1
Au0.397
Energy-28.6
Binding len20
Me-11.129
Phylopstem-0.17435235555555556
Phylopflank-0.34584986500000003
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure