Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACCTGCGGCTGCAGA
((((((((((((..(((((..&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014916
GeneSymbolLMTK2
Binding site1538,1556
Score0.827
Seed1
Au0.426
Energy-25.3
Binding len18
Me-6.084
Phylopstem5.41241525
Phylopflank4.1426563325
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure