Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACATCCTGCAGCTGTGAA
((((((((((((.(((..(((&))))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014916
GeneSymbolLMTK2
Binding site6146,6167
Score1.0
Seed1
Au0.412
Energy-22.2
Binding len21
Me-5.227
Phylopstem0.043029166666666646
Phylopflank-0.44761836125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure