Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGCAATGGCGAGCTAAGCCGGAGGATGTGCAGCTGCGGCGGCGGC
((((.((((((((((((....&.)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014918
GeneSymbolCHSY1
Binding site105,155
Score0.923
Seed0
Au0.265
Energy-23.5
Binding len19
Me-8.057
Phylopstem2.8364125000000002
Phylopflank1.9483632625
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure